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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr6|43549488|43555964|-|5|circRNA|XPO5|ENST00000265351.11|17,16,15,14,13 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chr6|43549488|43558591|-|6|circRNA|XPO5|ENST00000265351.11|17,16,15,14,13,12 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chr6|43555835|43567354|-|7|circRNA|XPO5|ENST00000265351.11|13,12,11,10,9,8,7 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr6|43565659|43573601|-|7|circRNA|XPO5|ENST00000265351.11|8,7,6,5,4,3,2 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr6|43597695|43601091|+|2|circRNA|POLH|NM_001291969|3,4 | Not cell-type specific | N/A | Not differentially expressed | SW480 | Not differentially expressed | Not cell-type specific |
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