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TMECircDB

The Maher Lab | Washington University

CircRNA Cell-Type Specific Expression

Use criteria below to search among 11,682 circRNAs:

*Click CircRNA to view comprehensive information in new page.

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​*CircRNA IDs are unique identifiers assigned to each circRNA in the format of

“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”

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*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.

CircRNA*
Cell-Type Specificity
CRAMS ID
Differential Expression Status
Cell Line Expression
DE Support by Other Tools
Cell-Type Specificity Support by circSC
chr6|90088960|90271941|-|4|circRNA|BACH2|NM_021813|5,4,3,2
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr6|93356716|93358411|-|2|circRNA|EPHA7|ENST00000369303.8|5,4
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr6|93454644|93630027|+|3|circRNA|Unknown|T308203|2,3,4
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr6|96523145|96540655|+|10|circRNA|UFL1|ENST00000369278.4|2,3,4,5,6,7,8,9,10,11
Not cell-type specific
N/A
Not differentially expressed
Not expressed in cell lines
Not differentially expressed
Not cell-type specific
chr6|97267871|97273062|-|4|circRNA|MMS22L|ENST00000275053.8|8,7,6,5
Not cell-type specific
N/A
Not differentially expressed
HCT116,HT29,LoVo,SW480
Not differentially expressed
Not cell-type specific
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