top of page
CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chrX|150699194|150718700|+|3|circRNA|MTMR1|ENST00000493995.6|2,3,4 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chrX|150727214|150732730|+|6|circRNA|MTMR1|NM_001306145|4,5,6,7,8,9 | Not cell-type specific | N/A | Not differentially expressed | LoVo,SW620 | Not differentially expressed | Not cell-type specific |
chrX|150727214|150737448|+|8|circRNA|MTMR1|NM_001306144|5,6,7,8,9,10,11,12 | Not cell-type specific | N/A | Not differentially expressed | HT29 | Not differentially expressed | Not cell-type specific |
chrX|150736594|150737448|+|2|circRNA|MTMR1|NM_001306144|11,12 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo | Not differentially expressed | Not cell-type specific |
chrX|150793690|150816078|-|5|circRNA|CD99L2|NM_001242614|7,6,5,4,3 | Not cell-type specific | N/A | Not differentially expressed | HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
Page 1 of 1
bottom of page