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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr7|75125915|75143978|+|9|circRNA|GTF2IRD2B|NM_001003795|7,8,9,10,11,12,13,14,15 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr7|75136784|75142665|+|4|circRNA|GTF2IRD2B|NM_001003795|11,12,13,14 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr7|75138949|75143978|+|4|circRNA|GTF2IRD2B|NM_001003795|12,13,14,15 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr7|75165123|75166877|-|3|circRNA|NCF1C|NR_003187|5,4,3 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr7|75188074|75189256|-|2|circRNA|GTF2IP1|NR_002206_DUP1|22,21 | Not cell-type specific | N/A | Not differentially expressed | SW480,SW620 | Not differentially expressed | Not cell-type specific |
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