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CircRNA Cell-Type Specific Expression
Use criteria below to search among 11,682 circRNAs:
*Click CircRNA to view comprehensive information in new page.
*CircRNA IDs are unique identifiers assigned to each circRNA in the format of
“chromosome|start position|end position|strand|number of exons|type of circRNA|gene name|transcript ID|exon indices”
*Myeloid Cells from Lee et al. and Macrophages from Li et al. are considered the same cell type; Endothelial Cells and Fibroblasts from Li et al. are considered as subtypes of Stromal Cells from Lee et al. Cell-type specificity is based on the consensus of both models.
CircRNA* | Cell-Type Specificity | CRAMS ID | Differential Expression Status | Cell Line Expression | DE Support by Other Tools | Cell-Type Specificity Support by circSC |
|---|---|---|---|---|---|---|
chr7|87770580|87777955|+|2|circRNA|RUNDC3B|ENST00000338056.7|8,9 | Not cell-type specific | N/A | Not differentially expressed | Not expressed in cell lines | Not differentially expressed | Not cell-type specific |
chr7|87964633|87978412|+|2|circRNA|ADAM22|ENST00000412441.5|3,4 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr7|90372154|90378211|+|4|circRNA|GTPBP10|ENST00000257659.12|3,4,5,6 | Not cell-type specific | N/A | Not differentially expressed | HCT116,HT29,LoVo,SW480,SW620 | Not differentially expressed | Not cell-type specific |
chr7|90726566|90726812|+|1|circRNA|CDK14|ENST00000449528.5|6 | Not cell-type specific | N/A | Not differentially expressed | HCT116,LoVo | Not differentially expressed | Not cell-type specific |
chr7|90726566|90747775|+|2|circRNA|CDK14|ENST00000449528.5|6,7 | Not cell-type specific | N/A | Not differentially expressed | LoVo | Not differentially expressed | Not cell-type specific |
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