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McDonnell Genome Institute

Washington University

CircRNA

Gene

chr11|71075158|71147338|-|7|circRNA|SHANK2|NM_012309|8,7,6,5,4,3,2

SHANK2

Open Reading Frame (ORF)

LQVRARAAPGAPAVLRGRHECPECLGEHGLAHLRPLQPDTGSHAAQPNIQRGRDGPELLRLLRGVGVRQLQRRDHL

Peptide

HECPECLGEHGLAHLRPLQPDTGSHAAQPNIQR

ORF Found in Long-Read

false

Peptide Length

33

Stop Codon

TGA

Peptide Type

Junction

Frame

3

Proteome Support

PDC000109

ORF Type

Junction

Start Codon

CTG

Number of Amino Acids from 3' Exons

20

Number of Amino Acids from 5' Exons

13

Short Read Rescue Status

NA

CircRNA Exists in PepTransDB

false

Differentially Expressed in mCRC

NA

Peptide Exists in PepTransDB

false

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