top of page
CircRNA
Gene
chr11|71075158|71147338|-|7|circRNA|SHANK2|NM_012309|8,7,6,5,4,3,2
SHANK2
CircRNA UID
circSHANK2(8,7,6,5,4,3,2)
Open Reading Frame (ORF)
LQVRARAAPGAPAVLRGRHECPECLGEHGLAHLRPLQPDTGSHAAQPNIQRGRDGPELLRLLRGVGVRQLQRRDHL
Peptide
GRDGPELLR
ORF Found in Long-Read
false
Peptide Length
9
Stop Codon
TGA
Peptide Type
Alternative
Frame
3
Proteome Support
PDC000109
ORF Type
Junction
Start Codon
CTG
Number of Amino Acids from 3' Exons
9
Number of Amino Acids from 5' Exons
0
Short Read Rescue Status
NA
CircRNA Exists in PepTransDB
false
Differentially Expressed in mCRC
NA
Peptide Exists in PepTransDB
false
Ribo-Seq Peptide Support
Ribo-Seq CircRNA Support
TransCirc
TranCirc
Potential Cryptic Translation
false
bottom of page