top of page

McDonnell Genome Institute

Washington University

CircRNA

Gene

chr1|3785086|3787310|-|2|circRNA|LRRC47|ENST00000378251.2|3,2

LRRC47

Open Reading Frame (ORF)

LRPAPTGPQDVGPLEQPAERDPCRACGLPQAQGDQFPWEQAEGQAPGEDGQRLPDQIHPGVPARRRPWWREGQGPCRGLGEGREPEEEEGEEAEAGRW

Peptide

ACGLPQAQGDQFPWEQAEGQAPGEDGQR

ORF Found in Long-Read

false

Peptide Length

28

Stop Codon

TGA

Peptide Type

Alternative

Frame

3

Proteome Support

PDC000109

ORF Type

Junction

Start Codon

CTG

Number of Amino Acids from 3' Exons

28

Number of Amino Acids from 5' Exons

0

Short Read Rescue Status

NA

CircRNA Exists in PepTransDB

false

Differentially Expressed in mCRC

NA

Peptide Exists in PepTransDB

false

bottom of page