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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VQVPSGAAVSLSK | XM_017005455.1 | Upstream_ORF | n[145]VQVPSGAAVSLSK | LOC102723730 | 1553130 | 1553339 | + | 0 | 0 | 0 | + | - | 0 | 69 | 7.55 | 12.23 | EOGC, HCC |
VQVPSGAAVSLSK | XM_017005455.1 | Upstream_ORF | n[230]VQVPSGAAVSLSK | LOC102723730 | 1553130 | 1553339 | + | 0 | 0 | 0 | + | - | 0 | 69 | 7.55 | 12.23 | EOGC, HCC |
VQWDFFAI | ENST00000594067.5 | Noncoding_RNA | n[145]VQWDFFAI | LIG1 | 48151359 | 48154021 | - | 0 | 0 | 0 | + | - | 0 | 58 | 6.76 | 12.59 | EOGC, HCC, LUAD, BRCA |
VQWDFFAI | ENST00000594067.5 | Noncoding_RNA | n[230]VQWDFFAI | LIG1 | 48151359 | 48154021 | - | 0 | 0 | 0 | + | - | 0 | 58 | 6.76 | 12.59 | EOGC, HCC, LUAD, BRCA |
VQYGGTK | XR_001745012.1 | Noncoding_RNA | n[145]VQYGGTK | LOC105375250 | 42516534 | 42516674 | + | 0 | 0 | 0 | + | - | 0 | 46 | 5.15 | 9.58 | BRCA, OSCC, OV, HCC, EOGC, LUAD |
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