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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VQTPLPGR | XM_011537522.2 | Downstream_ORF | n[230]VQTPLPGR | GRTP1 | 113338050 | 113338250 | - | 0 | 0 | 0 | - | - | 0 | 66 | 7.2 | 11.57 | BRCA, OV, HCC, EOGC |
VQTQASSANPK | ENST00000616974.1, ENST00000631321.1, NR_103810.1 | Noncoding_RNA | n[145]VQTQASSANPK | LINC00540 | 22275459 | 22275674 | + | 0 | 0 | 0 | - | - | 0 | 71 | 7.55 | 8.97 | BRCA, OV, EOGC, HCC |
VQTQASSANPK | ENST00000616974.1, ENST00000631321.1, NR_103810.1 | Noncoding_RNA | n[230]VQTQASSANPK | LINC00540 | 22275459 | 22275674 | + | 0 | 0 | 0 | - | - | 0 | 71 | 7.55 | 8.97 | BRCA, OV, EOGC, HCC |
VQVAGGSSHWGGSR | ENST00000563931.1 | Noncoding_RNA | AC135012.1 | 86083676 | 86083861 | - | 0 | 0 | 0 | + | - | 0 | 61 | 6.6 | 12.21 | PRAD, BRCA | |
VQVAGGSSHWGGSR | ENST00000563931.1 | Noncoding_RNA | n[145]VQVAGGSSHWGGSR | AC135012.1 | 86083676 | 86083861 | - | 0 | 0 | 0 | + | - | 0 | 61 | 6.6 | 12.21 | PRAD, BRCA |
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