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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VQQAGFRECSVQK | ENST00000440088.5, ENST00000447009.1, NR_038361.1, ENST00000398043.2, NR_134254.1, NR_134253.1 | Noncoding_RNA | VQQAGFRECSVQK | APTR | 77695947 | 77696126 | - | 0 | 15 | 0 | + | - | 0 | 59 | 6.44 | 9.09 | LUAD |
VQQDSEQLEPGLQSASMGVGFLSGR | ENST00000231420.10, NM_001306173.1, NM_031900.3, XM_005248337.3, ENST00000618015.4 | Upstream_ORF | n[145]VQQDSEQLEPGLQSASM[147]GVGFLSGR | AGXT2 | 35047825 | 35048028 | - | 0 | 0 | 1 | + | - | 0 | 67 | 7.28 | 6.06 | OV |
VQRDQMALGVK | ENST00000247781.4, ENST00000309791.8, NM_021110.3, XM_005251059.4, ENST00000297848.7, XM_017013809.2, XM_006716651.3 | Out-of-frame_RNA | n[145]VQRDQM[147]ALGVK | COL14A1 | 120300736 | 120332664 | + | 1 | 0 | 3 | - | - | 0 | 131 | 15.33 | 8 | EOGC, HCC |
VQRDQMALGVK | ENST00000247781.4, ENST00000309791.8, NM_021110.3, XM_005251059.4, ENST00000297848.7, XM_017013809.2, XM_006716651.3 | Out-of-frame_RNA | n[230]VQRDQM[147]ALGVK | COL14A1 | 120300736 | 120332664 | + | 1 | 0 | 3 | - | - | 0 | 131 | 15.33 | 8 | EOGC, HCC |
VQSAVLS | ENST00000528372.5 | Downstream_ORF | n[230]VQSAVLS | ZNF7 | 144843627 | 144843719 | + | 0 | 0 | 0 | - | - | 0 | 30 | 3.41 | 9.91 | HCC, LUAD, BRCA |
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