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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VSGLVSGQAGGR | ENST00000470434.1 | Noncoding_RNA | n[145]VSGLVSGQAGGR | SBF1 | 50455114 | 50455661 | - | 0 | 0 | 1 | - | - | 0 | 131 | 13.01 | 12.42 | BRCA, EOGC, OV |
VSGNLER | NM_001159673.1, NM_001159674.1, NM_001159676.1, ENST00000616122.4, NM_001253771.1, NM_001159677.1 | Downstream_ORF | SYNCRIP | 85607890 | 85608099 | - | 1 | 0 | 0 | - | - | 0 | 69 | 7.91 | 4.24 | LUAD, BRCA, EOGC, OV, CCRC, HCC, UCEC | |
VSGNLER | NM_001159673.1, NM_001159674.1, NM_001159676.1, ENST00000616122.4, NM_001253771.1, NM_001159677.1 | Downstream_ORF | n[145]VSGNLER | SYNCRIP | 85607890 | 85608099 | - | 1 | 0 | 0 | - | - | 0 | 69 | 7.91 | 4.24 | LUAD, BRCA, EOGC, OV, CCRC, HCC, UCEC |
VSGNLER | NM_001159673.1, NM_001159674.1, NM_001159676.1, ENST00000616122.4, NM_001253771.1, NM_001159677.1 | Downstream_ORF | n[230]VSGNLER | SYNCRIP | 85607890 | 85608099 | - | 1 | 0 | 0 | - | - | 0 | 69 | 7.91 | 4.24 | LUAD, BRCA, EOGC, OV, CCRC, HCC, UCEC |
VSGRPCSFQR | XR_001745261.1 | Noncoding_RNA | VSGRPCSFQR | LOC107986816 | 88742744 | 88742872 | + | 0 | 0 | 0 | - | - | 0 | 42 | 4.74 | 10.75 | LUAD, HCC |
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