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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VSQGAEVR | ENST00000276925.6, NM_004936.3, NM_078487.2 | Downstream_ORF | n[230]VSQGAEVR | CDKN2B | 22004799 | 22004945 | - | 0 | 0 | 1 | + | + | 3 | 48 | 5.62 | 8.51 | BRCA, LUAD, UCEC, CCRC |
VSQGTLR | XR_001749143.1, XR_944953.2 | Noncoding_RNA | n[145]VSQGTLR | LOC105369764 | 49964898 | 49965756 | - | 0 | 0 | 0 | - | - | 0 | 31 | 3.61 | 9.67 | BRCA, EOGC |
VSQILISCR | ENST00000460453.1 | Noncoding_RNA | n[145]VSQILISCR | FBH1 | 5915772 | 5915939 | + | 0 | 0 | 0 | - | - | 0 | 55 | 6.15 | 5.58 | BRCA |
VSQIYLIK | ENST00000623424.2, ENST00000647485.1 | Noncoding_RNA | n[145]VSQIYLIK | AC007614.1 | 49348355 | 49348474 | + | 0 | 0 | 0 | - | - | 3 | 39 | 4.59 | 7.7 | EOGC, OV, BRCA, HCC, LUAD, UCEC |
VSQIYLIK | ENST00000623424.2, ENST00000647485.1 | Noncoding_RNA | n[230]VSQIYLIK | AC007614.1 | 49348355 | 49348474 | + | 0 | 0 | 0 | - | - | 3 | 39 | 4.59 | 7.7 | EOGC, OV, BRCA, HCC, LUAD, UCEC |
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