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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VSLLWRPVR | ENST00000339464.8, ENST00000410058.1, NM_058238.2 | Upstream_ORF | n[230]VSLLWRPVR | WNT7B | 45931360 | 45976779 | - | 0 | 0 | 2 | - | - | 0 | 110 | 12.3 | 9.12 | HCC, LUAD, UCEC, CCRC |
VSLMTLPSR | ENST00000525380.1 | Downstream_ORF | n[145]VSLM[147]TLPSR | SCGB2A2 | 62271198 | 62271293 | + | 0 | 0 | 0 | - | - | 0 | 31 | 3.55 | 6.51 | EOGC, LUAD, OV |
VSLMTLPSR | ENST00000525380.1 | Downstream_ORF | n[230]VSLM[147]TLPSR | SCGB2A2 | 62271198 | 62271293 | + | 0 | 0 | 0 | - | - | 0 | 31 | 3.55 | 6.51 | EOGC, LUAD, OV |
VSLMTLPSR | ENST00000525380.1 | Downstream_ORF | n[43]VSLM[147]TLPSR | SCGB2A2 | 62271198 | 62271293 | + | 0 | 0 | 0 | - | - | 0 | 31 | 3.55 | 6.51 | EOGC, LUAD, OV |
VSLTQLMK | ENST00000220592.9, NM_001164623.2, NM_012154.4, XM_011516965.2, XM_011516966.3, XM_011516968.2, XM_017013317.2 | Downstream_ORF | n[145]VSLTQLMK | AGO2 | 140530678 | 140530953 | - | 0 | 0 | 1 | - | - | 4 | 91 | 10.34 | 10.92 | BRCA, EOGC, OV, CCRC, HCC, LUAD, UCEC |
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