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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VSVSLSPLQMGK | XM_011525729.3 | Upstream_ORF | n[145]VSVSLSPLQM[147]GK | TMEM200C | 5898158 | 5898472 | - | 0 | 0 | 0 | - | - | 0 | 104 | 11.34 | 8.06 | EOGC, OV, CCRC, HCC, LUAD, UCEC, OSCC |
VSVSLSPLQMGK | XM_011525729.3 | Upstream_ORF | n[230]VSVSLSPLQM[147]GK | TMEM200C | 5898158 | 5898472 | - | 0 | 0 | 0 | - | - | 0 | 104 | 11.34 | 8.06 | EOGC, OV, CCRC, HCC, LUAD, UCEC, OSCC |
VSVSSAQPAVPARPAEGSFQPHEGNTVLPR | ENST00000261657.5, ENST00000409790.5, NM_015226.2, XM_005255210.2, XM_005255211.2, XM_005255213.2, XM_005255214.2, XM_011522434.2, XM_011522435.2, XM_017023090.2, XM_024450219.1 | Downstream_ORF | n[145]VSVSSAQPAVPARPAEGSFQPHEGNTVLPR | CLEC16A | 11180175 | 11180375 | + | 0 | 0 | 0 | + | - | 0 | 66 | 6.95 | 7.72 | BRCA, EOGC, OSCC, OV, CCRC |
VSVSSAQPAVPARPAEGSFQPHEGNTVLPR | ENST00000261657.5, ENST00000409790.5, NM_015226.2, XM_005255210.2, XM_005255211.2, XM_005255213.2, XM_005255214.2, XM_011522434.2, XM_011522435.2, XM_017023090.2, XM_024450219.1 | Downstream_ORF | n[272]VSVSSAQPAVPARPAEGSFQPHEGNTVLPR | CLEC16A | 11180175 | 11180375 | + | 0 | 0 | 0 | + | - | 0 | 66 | 6.95 | 7.72 | BRCA, EOGC, OSCC, OV, CCRC |
VSVSVPAK | ENST00000568496.2 | Noncoding_RNA | n[145]VSVSVPAK | AC090826.1 | 74370558 | 74370659 | + | 0 | 0 | 0 | - | - | 0 | 33 | 3.56 | 10.51 | BRCA |
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