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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VSSMEAPSVGSMR | ENST00000248958.4, NM_022044.2 | Out-of-frame_RNA | n[230]VSSMEAPSVGSMR | SDF2L1 | 21644000 | 21644278 | + | 0 | 6 | 4 | - | - | 0 | 92 | 10.17 | 9.2 | BRCA, OV, EOGC, OSCC, HCC, LUAD |
VSSMEAPSVGSMR | ENST00000248958.4, NM_022044.2 | Out-of-frame_RNA | n[230]VSSM[147]EAPSVGSM[147]R | SDF2L1 | 21644000 | 21644278 | + | 0 | 6 | 4 | - | - | 0 | 92 | 10.17 | 9.2 | BRCA, OV, EOGC, OSCC, HCC, LUAD |
VSSPIQK | ENST00000226225.6, NM_021137.4, XM_017024993.2 | Downstream_ORF | n[145]VSSPIQK | TNFAIP1 | 28346632 | 28346859 | + | 0 | 0 | 1 | - | - | 0 | 75 | 8.03 | 8.78 | EOGC, OV, BRCA |
VSSRCPSDTQVGASGR | ENST00000506387.1 | Noncoding_RNA | n[145]VSSRCPSDTQVGASGR | KCNG1 | 51004987 | 51005109 | - | 0 | 0 | 0 | - | - | 0 | 40 | 4.22 | 4.48 | BRCA |
VSSTDWGVVLGK | XR_002957492.1 | Noncoding_RNA | n[145]VSSTDWGVVLGK | LOC112268109 | 106488844 | 106488981 | + | 3 | 0 | 0 | - | - | 0 | 45 | 4.84 | 10.24 | OSCC, BRCA |
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