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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VTGAGITRPGLPTTDR | ENST00000262487.4, NM_080826.1 | Out-of-frame_RNA | n[230]VTGAGITRPGLPTTDR | ISM1 | 13299014 | 13299550 | + | 0 | 0 | 2 | - | - | 0 | 178 | 18.77 | 12.73 | OV, HCC |
VTGAPSR | XR_002958352.1 | Noncoding_RNA | n[145]VTGAPSR | LOC112268235 | 116487285 | 116487392 | + | 0 | 0 | 0 | + | - | 0 | 35 | 3.91 | 10.51 | BRCA, EOGC |
VTGAVTGQASR | ENST00000595715.1, ENST00000600584.5 | Noncoding_RNA | n[145]VTGAVTGQASR | MAP2K2 | 4097328 | 4099511 | - | 0 | 0 | 0 | + | - | 0 | 108 | 11.1 | 12.88 | BRCA, EOGC, OV, OSCC, CCRC, HCC, UCEC, LUAD |
VTGAVTGQASR | ENST00000595715.1, ENST00000600584.5 | Noncoding_RNA | n[230]VTGAVTGQASR | MAP2K2 | 4097328 | 4099511 | - | 0 | 0 | 0 | + | - | 0 | 108 | 11.1 | 12.88 | BRCA, EOGC, OV, OSCC, CCRC, HCC, UCEC, LUAD |
VTGCWVLLLR | XR_947722.2 | Noncoding_RNA | n[145]VTGCWVLLLR | LINC01765 | 115099564 | 115099665 | + | 0 | 0 | 0 | - | - | 8 | 33 | 3.61 | 7.18 | BRCA, EOGC |
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