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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VTCSSLTWIHAIPSSMPLMFSNGK | XM_011542167.3 | Downstream_ORF | n[145]VTCSSLTWIHAIPSSM[147]PLM[147]FSNGK | RPAP2 | 92351989 | 92352156 | + | 0 | 0 | 0 | - | - | 0 | 55 | 6.3 | 9.23 | HCC, UCEC, PRAD, EOGC, LUAD |
VTCSSLTWIHAIPSSMPLMFSNGK | XM_011542167.3 | Downstream_ORF | n[230]VTCSSLTWIHAIPSSMPLM[147]FSNGK | RPAP2 | 92351989 | 92352156 | + | 0 | 0 | 0 | - | - | 0 | 55 | 6.3 | 9.23 | HCC, UCEC, PRAD, EOGC, LUAD |
VTDFNNEIGHLK | ENST00000215730.11, NM_004782.3 | Downstream_ORF | VTDFNNEIGHLK | SNAP29 | 20888998 | 20889150 | + | 0 | 0 | 1 | - | - | 0 | 50 | 6.1 | 10.48 | HCC, BRCA, EOGC, OV, CCRC, LUAD |
VTDFNNEIGHLK | ENST00000215730.11, NM_004782.3 | Downstream_ORF | n[145]VTDFNNEIGHLK | SNAP29 | 20888998 | 20889150 | + | 0 | 0 | 1 | - | - | 0 | 50 | 6.1 | 10.48 | HCC, BRCA, EOGC, OV, CCRC, LUAD |
VTDFNNEIGHLK | ENST00000215730.11, NM_004782.3 | Downstream_ORF | n[230]VTDFNNEIGHLK | SNAP29 | 20888998 | 20889150 | + | 0 | 0 | 1 | - | - | 0 | 50 | 6.1 | 10.48 | HCC, BRCA, EOGC, OV, CCRC, LUAD |
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