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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VTGNSVGLR | ENST00000476203.2 | Noncoding_RNA | n[145]VTGNSVGLR | MIGA1 | 77860273 | 77860512 | + | 0 | 0 | 0 | - | - | 7 | 79 | 9.05 | 11.24 | BRCA, EOGC |
VTGRGVAGAARRPR | ENST00000315480.8, ENST00000372429.7, NM_001008563.4, NM_001110303.3, ENST00000358355.5, XM_005251665.3, XM_011518161.2, XM_011518162.2, XM_024447389.1, XM_024447390.1, NM_006676.7 | Out-of-frame_RNA | n[145]VTGRGVAGAARRPR | USP20 | 129868120 | 129868251 | + | 0 | 0 | 4 | - | - | 0 | 43 | 4.55 | 12.8 | BRCA, LUAD |
VTGRGVAGAARRPR | ENST00000315480.8, ENST00000372429.7, NM_001008563.4, NM_001110303.3, ENST00000358355.5, XM_005251665.3, XM_011518161.2, XM_011518162.2, XM_024447389.1, XM_024447390.1, NM_006676.7 | Out-of-frame_RNA | n[230]VTGRGVAGAARRPR | USP20 | 129868120 | 129868251 | + | 0 | 0 | 4 | - | - | 0 | 43 | 4.55 | 12.8 | BRCA, LUAD |
VTGSSSLLR | ENST00000523176.1 | Noncoding_RNA | n[145]VTGSSSLLR | AC012613.2 | 149220287 | 149220427 | - | 0 | 0 | 1 | + | - | 1 | 46 | 4.76 | 9.15 | BRCA, LUAD, UCEC, HCC |
VTGSSSLLR | ENST00000523176.1 | Noncoding_RNA | n[230]VTGSSSLLR | AC012613.2 | 149220287 | 149220427 | - | 0 | 0 | 1 | + | - | 1 | 46 | 4.76 | 9.15 | BRCA, LUAD, UCEC, HCC |
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