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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VVLNNTR | XR_936795.3 | Noncoding_RNA | n[145]VVLNNTR | LOC105372637 | 47955436 | 47955672 | + | 0 | 0 | 0 | - | - | 0 | 78 | 8.84 | 10.75 | BRCA, CCRC, LUAD |
VVLNNTR | XR_936795.3 | Noncoding_RNA | n[230]VVLNNTR | LOC105372637 | 47955436 | 47955672 | + | 0 | 0 | 0 | - | - | 0 | 78 | 8.84 | 10.75 | BRCA, CCRC, LUAD |
VVLPAQRR | XM_005255198.2, XM_024450214.1 | Upstream_ORF | n[145]VVLPAQRR | XPO6 | 28166916 | 28167026 | - | 2 | 0 | 0 | - | - | 0 | 36 | 4.15 | 11.18 | BRCA |
VVLSVGNQDAHK | ENST00000428142.1, NR_148948.1 | Noncoding_RNA | n[145]VVLSVGNQDAHK | AC104024.1 | 16977294 | 16977506 | - | 0 | 0 | 1 | - | - | 0 | 70 | 7.66 | 10.48 | EOGC |
VTLMPMGSK | ENST00000251250.7 | Downstream_ORF | n[145]VTLMPMGSK | DTWD1 | 49652752 | 49653087 | + | 2 | 0 | 0 | - | - | 0 | 111 | 12.66 | 10.96 | LUAD, BRCA, EOGC, OV, OSCC, CCRC, HCC, UCEC |
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