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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VVNCTTMLK | XM_017008532.1 | Upstream_ORF | n[145]VVNCTTM[147]LK | RGS12 | 3369867 | 3369965 | + | 0 | 0 | 1 | - | - | 0 | 32 | 3.76 | 10.64 | EOGC |
VVPDGAR | ENST00000397973.2 | Noncoding_RNA | n[145]VVPDGAR | STARP1 | 65310230 | 65310385 | - | 1 | 0 | 0 | - | - | 0 | 51 | 5.93 | 12.51 | BRCA, EOGC, OV, HCC, LUAD, UCEC, CCRC |
VVPDGAR | ENST00000397973.2 | Noncoding_RNA | n[230]VVPDGAR | STARP1 | 65310230 | 65310385 | - | 1 | 0 | 0 | - | - | 0 | 51 | 5.93 | 12.51 | BRCA, EOGC, OV, HCC, LUAD, UCEC, CCRC |
VVPGGWGQGTTR | XM_024450707.1 | Downstream_ORF | MILR1 | 64469958 | 64470071 | + | 0 | 0 | 0 | + | - | 0 | 37 | 4.3 | 10.96 | LUAD, UCEC, CCRC | |
VVQFDGIR | ENST00000299308.7, ENST00000613307.1, NM_001286219.1, NM_052907.3, XM_011537852.2, XM_011537854.2, XM_017018767.1 | Downstream_ORF | TMEM132B | 125656399 | 125656668 | + | 0 | 0 | 1 | - | - | 0 | 89 | 9.47 | 7.91 | CCRC, HCC, LUAD |
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