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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VWLLINALK | NM_001198910.1, ENST00000379881.7, NM_017826.2 | Downstream_ORF | n[230]VWLLINALK | SOHLH2 | 36168641 | 36168910 | - | 0 | 0 | 1 | + | - | 5 | 89 | 10.15 | 10.18 | EOGC, OV, BRCA, CCRC, HCC, LUAD, UCEC |
VWMRHIHR | XR_935633.2 | Noncoding_RNA | LOC105376874 | 75166187 | 75166396 | + | 0 | 0 | 0 | - | - | 0 | 69 | 8 | 7.52 | HCC, LUAD, UCEC, CCRC | |
VWMSTQKPAAR | ENST00000586645.5, ENST00000590092.5, NR_026956.1 | Noncoding_RNA | n[145]VWMSTQKPAAR | LINC00663 | 19757926 | 19758156 | - | 0 | 0 | 0 | - | - | 0 | 76 | 8.81 | 11.48 | BRCA |
VWPAAGGLR | ENST00000244360.6, NM_025236.3, NM_170769.2, XM_017011326.1, ENST00000376751.7 | Out-of-frame_RNA | n[145]VWPAAGGLR | RNF39 | 30075360 | 30075704 | - | 0 | 0 | 3 | - | - | 0 | 114 | 12.89 | 12.91 | BRCA |
VWQPGPGAR | ENST00000468508.1 | Noncoding_RNA | SLC19A1 | 45512379 | 45512531 | - | 2 | 0 | 0 | - | - | 0 | 50 | 5.71 | 12.51 | CCRC, LUAD, HCC |
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