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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
YDSEREEK | XM_017010592.2 | Upstream_ORF | n[145]YDSEREEK | TAB2 | 149342238 | 149342375 | + | 0 | 0 | 0 | + | - | 3 | 45 | 5.77 | 5.64 | OV, HCC |
YDSEREEK | XM_017010592.2 | Upstream_ORF | n[230]YDSEREEK | TAB2 | 149342238 | 149342375 | + | 0 | 0 | 0 | + | - | 3 | 45 | 5.77 | 5.64 | OV, HCC |
YDVAISR | NM_001010924.1, XM_011519378.2, XM_017015904.1, ENST00000378116.8, XM_017015905.2 | Out-of-frame_RNA | n[145]YDVAISR | FAM171A1 | 15213876 | 15213974 | - | 0 | 0 | 0 | - | - | 0 | 32 | 3.68 | 9.32 | OV, HCC, LUAD |
YDVAISR | NM_001010924.1, XM_011519378.2, XM_017015904.1, ENST00000378116.8, XM_017015905.2 | Out-of-frame_RNA | n[230]YDVAISR | FAM171A1 | 15213876 | 15213974 | - | 0 | 0 | 0 | - | - | 0 | 32 | 3.68 | 9.32 | OV, HCC, LUAD |
YEDQWLVK | XR_938223.2 | Noncoding_RNA | n[145]YEDQWLVK | LOC105377199 | 36410681 | 36410839 | + | 0 | 0 | 0 | - | - | 4 | 52 | 6.11 | 11.6 | BRCA, OV, LUAD, UCEC |
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