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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TQRSMLLPEPRSLK | NR_027406.1 | Noncoding_RNA | n[145]TQRSM[147]LLPEPRSLK | LOC100129034 | 124356824 | 124356919 | + | 0 | 0 | 0 | - | - | 0 | 31 | 3.41 | 12.22 | CCRC, LUAD, UCEC, BRCA, HCC |
TQRSTNSTPSCR | ENST00000378182.3, ENST00000378183.8, ENST00000420995.6, ENST00000356017.8, NM_001007278.2, NM_005798.4, NM_052811.3, NM_213590.2, ENST00000457662.2 | Out-of-frame_RNA | TQRSTNSTPSCR | TRIM13 | 50012584 | 50012724 | + | 0 | 0 | 4 | - | - | 0 | 46 | 5.39 | 11.05 | LUAD |
TQRTVDYYK | XM_017009028.1 | Downstream_ORF | TQRTVDYYK | C5orf47 | 174007163 | 174007369 | + | 0 | 0 | 0 | - | - | 4 | 68 | 8.02 | 7.69 | LUAD |
TQSFSFGIDNPEAPFQILFGSR | XM_011533425.3, XM_011533427.2, XM_011533428.2, XM_006713004.4, XM_011533430.2, XM_011533431.2, XM_017005782.1, XM_017005783.1, XM_017005784.2, XM_017005785.1, XM_017005786.1, XM_017005787.1, XM_011533429.2 | Downstream_ORF | CNTN4 | 3058079 | 3058213 | + | 0 | 0 | 0 | - | - | 0 | 44 | 5.03 | 4.59 | LUAD | |
TQSNQIPQVGRR | ENST00000359546.8, NM_006650.3, XM_005265798.1, XM_005265799.1, NM_001008220.1, XM_017008964.1, XM_011534419.1 | Downstream_ORF | CPLX2 | 175882478 | 175882723 | + | 0 | 0 | 0 | - | - | 0 | 81 | 8.84 | 9.39 | UCEC, EOGC, OV |
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