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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TVQSSTFFR | XR_001738041.1 | Noncoding_RNA | n[145]TVQSSTFFR | LOC105379778 | 48181143 | 48181256 | + | 0 | 0 | 0 | - | - | 0 | 37 | 4.48 | 11.77 | EOGC, CCRC, LUAD, UCEC, HCC |
TVQSSTFFR | XR_001738041.1 | Noncoding_RNA | n[230]TVQSSTFFR | LOC105379778 | 48181143 | 48181256 | + | 0 | 0 | 0 | - | - | 0 | 37 | 4.48 | 11.77 | EOGC, CCRC, LUAD, UCEC, HCC |
TVSALPSATCSPWARR | ENST00000304735.3, NM_138440.2 | Downstream_ORF | TVSALPSATCSPWARR | VASN | 4383124 | 4383291 | + | 1 | 0 | 1 | - | - | 0 | 55 | 5.68 | 11.16 | CCRC, LUAD, UCEC, BRCA, EOGC |
TVSALPSATCSPWARR | ENST00000304735.3, NM_138440.2 | Downstream_ORF | n[145]TVSALPSATCSPWARR | VASN | 4383124 | 4383291 | + | 1 | 0 | 1 | - | - | 0 | 55 | 5.68 | 11.16 | CCRC, LUAD, UCEC, BRCA, EOGC |
TVSALPSATCSPWARR | ENST00000304735.3, NM_138440.2 | Downstream_ORF | n[230]TVSALPSATCSPWARR | VASN | 4383124 | 4383291 | + | 1 | 0 | 1 | - | - | 0 | 55 | 5.68 | 11.16 | CCRC, LUAD, UCEC, BRCA, EOGC |
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