top of page
Peptides from upstream, downstream and out-of-frame ORFs
Use criteria below to search
Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAAPTSALPEPR | ENST00000378623.5, NM_002334.3, XM_011520103.2, XM_017017734.1, XM_011520104.2 | Out-of-frame_RNA | n[145]VAAPTSALPEPR | LRP4 | 46868073 | 46868689 | - | 0 | 0 | 1 | + | - | 0 | 43 | 4.53 | 7.35 | EOGC |
VAASFSIK | ENST00000299824.5, ENST00000373331.2, NM_015568.3, XM_011528768.3, XM_011528769.2, NM_001172735.2, XM_017027785.1 | Downstream_ORF | n[145]VAASFSIK | PPP1R16B | 38921826 | 38921921 | + | 1 | 0 | 1 | + | - | 0 | 31 | 3.26 | 9.53 | OV |
VAASPPVR | ENST00000372409.7 | Upstream_ORF | n[145]VAASPPVR | PCIF1 | 45934628 | 45937486 | + | 0 | 0 | 3 | + | - | 0 | 81 | 8.71 | 12.63 | EOGC, OV |
VAATMIILK | ENST00000330163.8, ENST00000338354.8, ENST00000344338.7, ENST00000368909.7, ENST00000368955.7, ENST00000368956.6, ENST00000619379.1, NM_001320644.1, NM_004406.2, NM_007329.2, NM_017579.2, XM_006717660.3, XM_006717665.3, XM_011539388.3, XM_011539389.3, XM_011539390.3, XM_011539391.3, XM_011539392.3, XM_011539393.3, XM_011539394.3, XM_011539395.3, XM_011539396.2, XM_011539398.3, XM_011539399.2, XM_011539400.3, XM_011539401.3, XM_011539402.3, XM_011539403.3, XM_011539405.3, XM_011539407.3, XM_011539408.3, XM_011539409.3, XM_011539410.3, XM_011539411.3, XM_011539413.3, XM_011539414.3, XM_011539415.3, XM_017015798.1, XM_024447854.1 | Out-of-frame_RNA | VAATMIILK | DMBT1 | 122633335 | 122637166 | + | 0 | 0 | 5 | - | - | 3 | 84 | 8.51 | 6.18 | CCRC, HCC, UCEC, LUAD, EOGC, OV |
VAATMIILK | ENST00000330163.8, ENST00000338354.8, ENST00000344338.7, ENST00000368909.7, ENST00000368955.7, ENST00000368956.6, ENST00000619379.1, NM_001320644.1, NM_004406.2, NM_007329.2, NM_017579.2, XM_006717660.3, XM_006717665.3, XM_011539388.3, XM_011539389.3, XM_011539390.3, XM_011539391.3, XM_011539392.3, XM_011539393.3, XM_011539394.3, XM_011539395.3, XM_011539396.2, XM_011539398.3, XM_011539399.2, XM_011539400.3, XM_011539401.3, XM_011539402.3, XM_011539403.3, XM_011539405.3, XM_011539407.3, XM_011539408.3, XM_011539409.3, XM_011539410.3, XM_011539411.3, XM_011539413.3, XM_011539414.3, XM_011539415.3, XM_017015798.1, XM_024447854.1 | Out-of-frame_RNA | n[145]VAATMIILK | DMBT1 | 122633335 | 122637166 | + | 0 | 0 | 5 | - | - | 3 | 84 | 8.51 | 6.18 | CCRC, HCC, UCEC, LUAD, EOGC, OV |
Page 1 of 1
bottom of page