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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAADIGGR | XM_017014282.2 | Upstream_ORF | n[145]VAADIGGR | PTPDC1 | 94030704 | 94030808 | + | 1 | 0 | 0 | - | - | 0 | 34 | 3.76 | 12.98 | PRAD, BRCA, OSCC, HCC, LUAD, EOGC |
VAADIGGR | XM_017014282.2 | Upstream_ORF | n[230]VAADIGGR | PTPDC1 | 94030704 | 94030808 | + | 1 | 0 | 0 | - | - | 0 | 34 | 3.76 | 12.98 | PRAD, BRCA, OSCC, HCC, LUAD, EOGC |
VAAFLFLK | ENST00000419168.2, NR_125860.1 | Noncoding_RNA | AL359547.1 | 146595971 | 146596060 | - | 0 | 0 | 0 | - | - | 0 | 29 | 3.06 | 4.43 | PRAD, CCRC | |
VAAFLFLK | ENST00000419168.2, NR_125860.1 | Noncoding_RNA | LOC101928661 | 146595971 | 146596060 | - | 0 | 0 | 0 | - | - | 0 | 29 | 3.06 | 4.43 | PRAD, CCRC | |
VAAFLFLK | ENST00000419168.2, NR_125860.1 | Noncoding_RNA | VAAFLFLK | AL359547.1 | 146595971 | 146596060 | - | 0 | 0 | 0 | - | - | 0 | 29 | 3.06 | 4.43 | PRAD, CCRC |
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