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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAFFQPQMR | ENST00000341148.7, ENST00000401878.7, XM_005249531.1, XM_005249532.1, XM_005249533.1, NM_053043.2, XM_005249535.1, XM_011515840.1, XM_005249534.1 | Downstream_ORF | n[145]VAFFQPQM[147]R | RBM33 | 155775917 | 155776123 | + | 0 | 0 | 1 | - | - | 7 | 68 | 7.19 | 8.7 | BRCA |
VAFSWVGR | ENST00000314927.4, ENST00000619681.1 | Noncoding_RNA | n[145]VAFSWVGR | AC105206.1 | 22171080 | 22171214 | + | 0 | 0 | 0 | - | - | 0 | 44 | 4.88 | 12.22 | EOGC |
VAGAAPDGK | ENST00000591484.1 | Noncoding_RNA | n[145]VAGAAPDGK | AC010327.4 | 55216805 | 55217335 | + | 1 | 0 | 0 | - | - | 0 | 176 | 19.08 | 9.93 | BRCA, HCC, LUAD, UCEC, CCRC |
VAGAAPDGK | ENST00000591484.1 | Noncoding_RNA | n[230]VAGAAPDGK | AC010327.4 | 55216805 | 55217335 | + | 1 | 0 | 0 | - | - | 0 | 176 | 19.08 | 9.93 | BRCA, HCC, LUAD, UCEC, CCRC |
VAGAEWLESWRPWGFGGQGK | ENST00000586923.1, ENST00000585416.1 | Noncoding_RNA | n[145]VAGAEWLESWRPWGFGGQGK | AC010327.5 | 55227637 | 55227888 | - | 0 | 0 | 0 | - | - | 0 | 83 | 8.65 | 8.52 | EOGC, BRCA, HCC |
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