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The Maher Lab

McDonnell Genome Institute

Washington University School of Medicine in St. Louis

CrypticProteinDB

The Maher Lab | Washington University

Cryptic variants

Peptides from upstream, downstream and out-of-frame ORFs

Use criteria below to search

Peptide	Transcripts	Type	Modified peptide	Gene	Start	End	Strand	MS score	TE score	#Species with ortholog	Kozak motif	TIS motif	Domains	Protein length(aa)	Molecular weight	Isoelectric point	Cancers
VAGTSDGPPLLAPSR	ENST00000261569.11, ENST00000403625.6, ENST00000405643.5, ENST00000443808.1, NM_001164664.1, NM_001290226.1, NM_001290227.1, NM_001297651.1, NM_015183.2, XM_006714606.3, XM_006714610.2, XM_011543384.2, XM_011543385.3, XM_011543386.2, XM_017009449.1, XM_017009450.1, XM_017009451.1, XM_017009452.1, XM_017009453.1, XM_024446044.1, ENST00000403666.5	Out-of-frame_RNA	n[145]VAGTSDGPPLLAPSR	MAST4	67163993	67164217	+	1	0	1	-	-	1	74	7.73	12.51	BRCA, LUAD
VAGTSDGPPLLAPSR	ENST00000261569.11, ENST00000403625.6, ENST00000405643.5, ENST00000443808.1, NM_001164664.1, NM_001290226.1, NM_001290227.1, NM_001297651.1, NM_015183.2, XM_006714606.3, XM_006714610.2, XM_011543384.2, XM_011543385.3, XM_011543386.2, XM_017009449.1, XM_017009450.1, XM_017009451.1, XM_017009452.1, XM_017009453.1, XM_024446044.1, ENST00000403666.5	Out-of-frame_RNA	n[230]VAGTSDGPPLLAPSR	MAST4	67163993	67164217	+	1	0	1	-	-	1	74	7.73	12.51	BRCA, LUAD
VAGVALNAPRQR	ENST00000642898.1, ENST00000644563.1, NR_120542.1, NR_120543.1, NR_120544.1, NR_120545.1	Noncoding_RNA	n[145]VAGVALNAPRQR	LINC01488	69492837	69493052	+	2	0	1	-	-	0	71	7.81	11.76	OV, BRCA
VAHGADALR	ENST00000464420.5, ENST00000482677.5, NR_109992.1, NR_109993.1	Noncoding_RNA	n[145]VAHGADALR	SUCLG2-AS1	67654944	67655048	+	1	0	0	+	-	0	34	3.57	10.25	EOGC, OV, BRCA
VAHLQMR	XR_245234.3, XR_940914.1, XR_940915.1, XR_940916.1	Noncoding_RNA		LOC101929316	64455609	64455707	+	0	0	0	-	-	0	32	3.65	10.5	CCRC, LUAD, BRCA, HCC

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