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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAGQVLPAQGALCPSHSPPK | ENST00000373255.8, NM_018649.2 | Downstream_ORF | VAGQVLPAQGALCPSHSPPK | H2AFY2 | 70111768 | 70111917 | + | 0 | 0 | 1 | + | - | 0 | 49 | 5.31 | 9.76 | HCC, PRAD, EOGC, OSCC, OV, CCRC, LUAD |
VAGQVLPAQGALCPSHSPPK | ENST00000373255.8, NM_018649.2 | Downstream_ORF | n[145]VAGQVLPAQGALCPSHSPPK | H2AFY2 | 70111768 | 70111917 | + | 0 | 0 | 1 | + | - | 0 | 49 | 5.31 | 9.76 | HCC, PRAD, EOGC, OSCC, OV, CCRC, LUAD |
VAGQVLPAQGALCPSHSPPK | ENST00000373255.8, NM_018649.2 | Downstream_ORF | n[230]VAGQVLPAQGALCPSHSPPK | H2AFY2 | 70111768 | 70111917 | + | 0 | 0 | 1 | + | - | 0 | 49 | 5.31 | 9.76 | HCC, PRAD, EOGC, OSCC, OV, CCRC, LUAD |
VAGRGCRLHAR | XR_002959480.1, XR_002959481.1 | miscRNA | n[145]VAGRGCRLHAR | MRPL55 | 228108267 | 228110006 | - | 1 | 0 | 0 | - | - | 0 | 301 | 31.37 | 11.92 | BRCA, OV, CCRC, HCC |
VAGRGCRLHAR | XR_002959480.1, XR_002959481.1 | miscRNA | n[230]VAGRGCRLHAR | MRPL55 | 228108267 | 228110006 | - | 1 | 0 | 0 | - | - | 0 | 301 | 31.37 | 11.92 | BRCA, OV, CCRC, HCC |
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