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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAGFAGASGK | ENST00000521653.5 | Noncoding_RNA | n[145]VAGFAGASGK | LINC01606 | 57208113 | 57208520 | + | 0 | 0 | 0 | + | - | 0 | 37 | 3.83 | 9.66 | HCC, OSCC, BRCA |
VAGGEMGAER | XR_001746520.2 | Noncoding_RNA | LOC101927603 | 85535971 | 85536177 | - | 1 | 0 | 0 | - | - | 0 | 68 | 7.82 | 9.27 | UCEC | |
VAGGVQAVR | ENST00000624683.1 | Noncoding_RNA | KDM4B | 5078808 | 5078993 | + | 0 | 0 | 0 | - | - | 0 | 61 | 6.2 | 11.84 | CCRC, OSCC, OV, HCC, EOGC | |
VAGGVQAVR | ENST00000624683.1 | Noncoding_RNA | n[145]VAGGVQAVR | KDM4B | 5078808 | 5078993 | + | 0 | 0 | 0 | - | - | 0 | 61 | 6.2 | 11.84 | CCRC, OSCC, OV, HCC, EOGC |
VAGGVQAVR | ENST00000624683.1 | Noncoding_RNA | n[230]VAGGVQAVR | KDM4B | 5078808 | 5078993 | + | 0 | 0 | 0 | - | - | 0 | 61 | 6.2 | 11.84 | CCRC, OSCC, OV, HCC, EOGC |
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