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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAQSHCSLK | ENST00000280758.9, ENST00000357167.8, ENST00000494235.2, NM_001017523.1, NM_001018072.1, ENST00000420571.6, NM_001347944.1, XM_005268645.3, XM_011537909.2, NM_001347943.1, XM_017018807.2, XM_011537910.3 | Out-of-frame_RNA | n[43]VAQSHCSLK | BTBD11 | 107649228 | 107657566 | + | 0 | 0 | 3 | + | - | 6 | 72 | 8.18 | 10.78 | BRCA, LUAD |
VAQSLFLQIR | XM_011514089.2 | Downstream_ORF | n[145]VAQSLFLQIR | CPLANE1 | 37077063 | 37077236 | - | 0 | 0 | 0 | + | - | 0 | 57 | 6.6 | 10.26 | BRCA |
VAQTPGK | XM_017006293.1 | Upstream_ORF | n[145]VAQTPGK | C3orf35 | 37399710 | 37399883 | + | 0 | 0 | 0 | + | - | 4 | 57 | 5.91 | 8.79 | BRCA, LUAD, HCC |
VAQTPGK | XM_017006293.1 | Upstream_ORF | n[230]VAQTPGK | C3orf35 | 37399710 | 37399883 | + | 0 | 0 | 0 | + | - | 4 | 57 | 5.91 | 8.79 | BRCA, LUAD, HCC |
VASACQLK | XR_001739272.1 | Noncoding_RNA | n[145]VASACQLK | LOC107985848 | 7672692 | 7672817 | - | 0 | 0 | 0 | - | - | 0 | 41 | 4.56 | 10.62 | BRCA, OV, CCRC, LUAD |
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