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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VAWSSILSRR | NR_024368.1 | Noncoding_RNA | LINC01000 | 128657517 | 128657687 | + | 0 | 0 | 0 | - | - | 5 | 56 | 6.09 | 9.61 | CCRC, LUAD, UCEC, HCC | |
VCALSTAPSK | ENST00000497933.1, NM_001005210.2 | Downstream_ORF | n[145]VCALSTAPSK | LRRC55 | 57188629 | 57188751 | + | 0 | 0 | 0 | - | - | 0 | 40 | 4.56 | 10.13 | OSCC, CCRC |
VCALSTAPSK | ENST00000497933.1, NM_001005210.2 | Downstream_ORF | n[230]VCALSTAPSK | LRRC55 | 57188629 | 57188751 | + | 0 | 0 | 0 | - | - | 0 | 40 | 4.56 | 10.13 | OSCC, CCRC |
VCCSLALQRR | XR_001745182.1 | Noncoding_RNA | VCCSLALQRR | LOC107986786 | 40463909 | 40464001 | - | 0 | 0 | 0 | - | - | 0 | 30 | 3.39 | 8.51 | LUAD |
VCFTPIMIARN | ENST00000172853.14, ENST00000397345.7, ENST00000409198.5, ENST00000427231.6, ENST00000603639.5, ENST00000604864.5, ENST00000618972.4, NM_001164507.1, NM_001164508.1, NM_001271208.1, NM_004543.4, XM_005246590.2, XM_005246591.2, XM_005246592.2, XM_005246593.2, XM_005246594.2, XM_005246596.2, XM_005246597.2, XM_005246598.2, XM_005246599.2, XM_005246601.2, XM_005246602.2, XM_005246603.2, XM_005246604.2, XM_005246606.2, XM_005246608.2, XM_005246610.2, XM_005246611.2, XM_005246612.2, XM_005246613.2, XM_005246615.2, XM_005246616.1, XM_005246617.2, XM_006712541.2, XM_006712542.2, XM_011511225.2, XM_011511226.2, XM_011511227.2, XM_017004177.1, XM_017004178.1, XM_017004179.1, XM_017004180.1, XM_017004181.1, XM_017004182.1, XM_017004183.1, XM_017004184.1, XM_017004185.1 | Out-of-frame_RNA | n[145]VCFTPIM[147]IARN | NEB | 151723417 | 151724912 | - | 0 | 0 | 5 | - | - | 6 | 76 | 8.81 | 12.2 | EOGC, BRCA |
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