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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VATNQEILK | NM_021201.4, NM_206938.1, NM_206939.1, NM_206940.1, ENST00000358246.5 | Downstream_ORF | n[145]VATNQEILK | MS4A7 | 60395423 | 60395512 | + | 0 | 0 | 1 | - | - | 0 | 29 | 3.4 | 8.52 | HCC, EOGC, OSCC, OV, LUAD |
VATNQEILK | NM_021201.4, NM_206938.1, NM_206939.1, NM_206940.1, ENST00000358246.5 | Downstream_ORF | n[272]VATNQEILK | MS4A7 | 60395423 | 60395512 | + | 0 | 0 | 1 | - | - | 0 | 29 | 3.4 | 8.52 | HCC, EOGC, OSCC, OV, LUAD |
VAVEMGK | XR_001739576.1 | Noncoding_RNA | n[145]VAVEMGK | LOC105374839 | 85244416 | 85244526 | + | 0 | 0 | 0 | - | - | 0 | 36 | 3.93 | 10.78 | BRCA, EOGC, CCRC, HCC, LUAD, UCEC, OV |
VAVEMGK | XR_001739576.1 | Noncoding_RNA | n[145]VAVEM[147]GK | LOC105374839 | 85244416 | 85244526 | + | 0 | 0 | 0 | - | - | 0 | 36 | 3.93 | 10.78 | BRCA, EOGC, CCRC, HCC, LUAD, UCEC, OV |
VAVEMGK | XR_001739576.1 | Noncoding_RNA | n[230]VAVEMGK | LOC105374839 | 85244416 | 85244526 | + | 0 | 0 | 0 | - | - | 0 | 36 | 3.93 | 10.78 | BRCA, EOGC, CCRC, HCC, LUAD, UCEC, OV |
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