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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VASESYMIVAPPMPSSWSSSGR | ENST00000377214.8, ENST00000539846.5, ENST00000593945.5, ENST00000311227.6, ENST00000601519.5, NM_001256658.1, NM_001256659.1, NM_001256660.1, NM_001256661.1, NM_001256662.1, NM_003598.1, XM_005259334.4, XM_006723428.3, XM_006723429.2, XM_011527399.2, XM_011527400.2, ENST00000598810.5, XM_011527402.2, XM_011527403.1, XM_011527404.2, XM_011527401.1 | Out-of-frame_RNA | n[230]VASESYMIVAPPM[147]PSSWSSSGR | TEAD2 | 49343389 | 49348716 | - | 0 | 0 | 4 | - | - | 1 | 65 | 7.09 | 12.21 | PRAD, BRCA, EOGC, OV, LUAD |
VASGEQNPGVMAIPSPQFK | XM_017026923.2 | Upstream_ORF | n[145]VASGEQNPGVMAIPSPQFK | SAMD4B | 39347604 | 39347738 | + | 0 | 0 | 0 | - | - | 0 | 44 | 4.74 | 9.67 | BRCA, EOGC, OV, PRAD |
VASGEQNPGVMAIPSPQFK | XM_017026923.2 | Upstream_ORF | SAMD4B | 39347604 | 39347738 | + | 0 | 0 | 0 | - | - | 0 | 44 | 4.74 | 9.67 | BRCA, EOGC, OV, PRAD | |
VASGEQNPGVMAIPSPQFK | XM_017026923.2 | Upstream_ORF | n[145]VASGEQNPGVM[147]AIPSPQFK | SAMD4B | 39347604 | 39347738 | + | 0 | 0 | 0 | - | - | 0 | 44 | 4.74 | 9.67 | BRCA, EOGC, OV, PRAD |
VASGLLAR | XM_017030091.1 | Downstream_ORF | n[145]VASGLLAR | LOC107987345 | 19042437 | 19042574 | - | 1 | 0 | 0 | - | - | 4 | 45 | 4.94 | 10.99 | BRCA, OSCC, UCEC, HCC |
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