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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VCSLGNAIFSK | ENST00000297267.13, NM_032532.2, XM_011536190.2, XM_011536191.2 | Out-of-frame_RNA | n[145]VCSLGNAIFSK | FNDC1 | 159229902 | 159232040 | + | 0 | 0 | 1 | - | - | 0 | 86 | 9.57 | 10.76 | BRCA, EOGC, HCC |
VCSLGNAIFSK | ENST00000297267.13, NM_032532.2, XM_011536190.2, XM_011536191.2 | Out-of-frame_RNA | n[230]VCSLGNAIFSK | FNDC1 | 159229902 | 159232040 | + | 0 | 0 | 1 | - | - | 0 | 86 | 9.57 | 10.76 | BRCA, EOGC, HCC |
VCSLGNAIFSK | ENST00000297267.13, NM_032532.2, XM_011536190.2, XM_011536191.2 | Out-of-frame_RNA | n[272]VCSLGNAIFSK | FNDC1 | 159229902 | 159232040 | + | 0 | 0 | 1 | - | - | 0 | 86 | 9.57 | 10.76 | BRCA, EOGC, HCC |
VCWGGMGQAVVLQHEEGAMR | ENST00000356331.9, ENST00000442312.6, ENST00000503393.6, NM_001145855.1, NM_001145856.1, NM_003023.4, NM_001122681.1 | Downstream_ORF | n[145]VCWGGM[147]GQAVVLQHEEGAMR | SH3BP2 | 2835906 | 2836367 | + | 0 | 0 | 0 | - | - | 1 | 153 | 16.19 | 8.16 | OSCC |
VCWSFLAASAK | ENST00000612851.1 | Noncoding_RNA | n[145]VCWSFLAASAK | VSIG10 | 118102632 | 118102760 | - | 1 | 0 | 0 | - | - | 0 | 42 | 4.7 | 8.51 | BRCA, HCC |
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