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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VEGGFLR | ENST00000396275.2, ENST00000621697.1, NM_054031.3, XM_011519882.2 | Out-of-frame_RNA | n[145]VEGGFLR | MRGPRX3 | 18138107 | 18138205 | + | 1 | 0 | 1 | - | - | 0 | 32 | 3.67 | 4.41 | BRCA, OSCC, OV, EOGC, CCRC, HCC, LUAD, UCEC |
VEGGFLR | ENST00000396275.2, ENST00000621697.1, NM_054031.3, XM_011519882.2 | Out-of-frame_RNA | n[230]VEGGFLR | MRGPRX3 | 18138107 | 18138205 | + | 1 | 0 | 1 | - | - | 0 | 32 | 3.67 | 4.41 | BRCA, OSCC, OV, EOGC, CCRC, HCC, LUAD, UCEC |
VEGGNGKR | XM_005271317.5, XM_006711033.3 | Upstream_ORF | n[145]VEGGNGKR | SLC16A4 | 110391522 | 110391614 | - | 0 | 0 | 0 | - | - | 0 | 30 | 3.34 | 11.11 | OV |
VEGLCQVHK | XR_946909.3, XR_946910.2 | Noncoding_RNA | n[145]VEGLCQVHK | LOC105376686 | 5493516 | 5493752 | - | 0 | 0 | 0 | - | - | 0 | 78 | 8.23 | 10.14 | BRCA, EOGC, OSCC, CCRC |
VEGLCQVHK | XR_946909.3, XR_946910.2 | Noncoding_RNA | n[230]VEGLCQVHK | LOC105376686 | 5493516 | 5493752 | - | 0 | 0 | 0 | - | - | 0 | 78 | 8.23 | 10.14 | BRCA, EOGC, OSCC, CCRC |
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