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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VFFNYSLL | NM_014267.5, XM_017017143.2, ENST00000228136.8 | Downstream_ORF | C11orf58 | 16755379 | 16755507 | + | 0 | 0 | 1 | - | - | 4 | 42 | 5.05 | 6.29 | UCEC | |
VFFTFIIGNPQK | ENST00000361127.5, XM_005271369.2, XM_017002952.2, XM_024451227.1, XM_024451231.1 | Downstream_ORF | VFFTFIIGNPQK | LRIG2 | 113130626 | 113130736 | + | 0 | 0 | 0 | + | - | 0 | 36 | 4.15 | 10.48 | CCRC, UCEC, LUAD |
VFFTFIIGNPQK | ENST00000361127.5, XM_005271369.2, XM_017002952.2, XM_024451227.1, XM_024451231.1 | Downstream_ORF | n[230]VFFTFIIGNPQK | LRIG2 | 113130626 | 113130736 | + | 0 | 0 | 0 | + | - | 0 | 36 | 4.15 | 10.48 | CCRC, UCEC, LUAD |
VFGEGLR | XR_001743887.1 | Noncoding_RNA | n[145]VFGEGLR | LOC105377911 | 100151364 | 100161426 | - | 0 | 0 | 0 | - | - | 0 | 92 | 10.89 | 10.98 | BRCA, EOGC, CCRC, HCC, LUAD, OSCC, UCEC |
VFGEGLR | XR_001743887.1 | Noncoding_RNA | n[230]VFGEGLR | LOC105377911 | 100151364 | 100161426 | - | 0 | 0 | 0 | - | - | 0 | 92 | 10.89 | 10.98 | BRCA, EOGC, CCRC, HCC, LUAD, OSCC, UCEC |
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