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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGAGTPPR | XM_011543282.3 | Upstream_ORF | n[145]VGAGTPPR | SV2C | 75847942 | 75848367 | + | 0 | 0 | 0 | + | - | 0 | 141 | 16.23 | 10.79 | UCEC, EOGC, HCC, LUAD |
VGAGTPPR | XM_011543282.3 | Upstream_ORF | n[230]VGAGTPPR | SV2C | 75847942 | 75848367 | + | 0 | 0 | 0 | + | - | 0 | 141 | 16.23 | 10.79 | UCEC, EOGC, HCC, LUAD |
VGAHAQEGACGTGAER | NM_152485.3 | Upstream_ORF | n[230]VGAHAQEGACGTGAER | C1orf74 | 209784396 | 209784608 | - | 0 | 0 | 0 | - | - | 0 | 70 | 6.94 | 11.48 | CCRC, LUAD, OV |
VGAHAQEGACGTGAER | NM_152485.3 | Upstream_ORF | n[145]VGAHAQEGACGTGAER | C1orf74 | 209784396 | 209784608 | - | 0 | 0 | 0 | - | - | 0 | 70 | 6.94 | 11.48 | CCRC, LUAD, OV |
VGAHGQQGR | XM_017029035.2, XM_017029036.1, XM_017029037.1 | Upstream_ORF | CACNA1I | 39654351 | 39654602 | + | 1 | 0 | 0 | - | - | 0 | 83 | 8.85 | 12.04 | LUAD, BRCA, EOGC, OV, CCRC |
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