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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGAAHLR | XR_001738528.1, XR_001738526.1 | Noncoding_RNA | n[230]VGAAHLR | LOC107985362 | 233706668 | 233706766 | - | 0 | 0 | 0 | - | - | 0 | 32 | 3.21 | 7.52 | UCEC, BRCA, EOGC, OV, CCRC |
VGAAPCVSCSR | ENST00000474481.1, ENST00000485748.5 | Noncoding_RNA | n[145]VGAAPCVSCSR | ATAD3B | 1484697 | 1485837 | + | 0 | 0 | 0 | - | - | 0 | 176 | 17.67 | 8.06 | BRCA |
VGACTGCVCMDILK | NM_003458.3, ENST00000296452.4 | Downstream_ORF | n[145]VGACTGCVCMDILK | BSN | 49669339 | 49669617 | + | 0 | 0 | 0 | + | - | 0 | 92 | 9.97 | 10.49 | EOGC, OV |
VGACTGCVCMDILK | NM_003458.3, ENST00000296452.4 | Downstream_ORF | n[145]VGACTGCVCM[147]DILK | BSN | 49669339 | 49669617 | + | 0 | 0 | 0 | + | - | 0 | 92 | 9.97 | 10.49 | EOGC, OV |
VGAEIPALGGR | ENST00000359120.8, NM_152550.3, XM_011537567.2, XM_011537568.2, XM_011537569.2 | Downstream_ORF | n[145]VGAEIPALGGR | SH3RF2 | 146062801 | 146062953 | + | 0 | 0 | 1 | + | - | 0 | 50 | 5.42 | 9.23 | BRCA, OSCC, EOGC, CCRC |
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