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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGDQVWDK | NM_001321882.1, XM_011518903.3, XM_011518904.3, XM_017015012.1, XM_024447648.1, XM_024447649.1 | Downstream_ORF | n[145]VGDQVWDK | NAA35 | 86024628 | 86024768 | + | 0 | 0 | 1 | - | - | 0 | 46 | 5.6 | 8.94 | BRCA, OV, EOGC |
VGDQYRPR | ENST00000429915.1 | Upstream_ORF | n[145]VGDQYRPR | WDFY1 | 223899065 | 223945327 | - | 0 | 0 | 2 | - | - | 0 | 134 | 14.85 | 9.46 | OSCC |
VGDSYTIAYNFTIK | XM_011526206.2, XM_017026012.1, XM_017026013.1, XM_017026014.2 | Upstream_ORF | VGDSYTIAYNFTIK | ASXL3 | 33602179 | 33602331 | + | 0 | 0 | 1 | - | - | 0 | 50 | 5.8 | 9.86 | CCRC, LUAD, UCEC, EOGC, HCC |
VGDSYTIAYNFTIK | XM_011526206.2, XM_017026012.1, XM_017026013.1, XM_017026014.2 | Upstream_ORF | n[145]VGDSYTIAYNFTIK | ASXL3 | 33602179 | 33602331 | + | 0 | 0 | 1 | - | - | 0 | 50 | 5.8 | 9.86 | CCRC, LUAD, UCEC, EOGC, HCC |
VGDSYTIAYNFTIK | XM_011526206.2, XM_017026012.1, XM_017026013.1, XM_017026014.2 | Upstream_ORF | n[230]VGDSYTIAYNFTIK | ASXL3 | 33602179 | 33602331 | + | 0 | 0 | 1 | - | - | 0 | 50 | 5.8 | 9.86 | CCRC, LUAD, UCEC, EOGC, HCC |
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