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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGAVRLPR | ENST00000393278.6, NM_001276271.1, NM_001276272.1, NM_001276273.1, NM_001276270.1, NM_003925.2 | Upstream_ORF | n[145]VGAVRLPR | MBD4 | 129440028 | 129440126 | - | 0 | 0 | 1 | + | - | 0 | 32 | 3.74 | 12.2 | BRCA |
VGCITLPDLK | ENST00000597346.1, NR_002728.3 | Noncoding_RNA | n[145]VGCITLPDLK | KCNQ1OT1 | 2642031 | 2642219 | - | 0 | 0 | 4 | - | - | 2 | 62 | 7.14 | 11.03 | OSCC, OV, EOGC, HCC |
VGCITLPDLK | ENST00000597346.1, NR_002728.3 | Noncoding_RNA | n[230]VGCITLPDLK | KCNQ1OT1 | 2642031 | 2642219 | - | 0 | 0 | 4 | - | - | 2 | 62 | 7.14 | 11.03 | OSCC, OV, EOGC, HCC |
VGCYGILGR | ENST00000630242.2, NR_026800.2 | Noncoding_RNA | n[145]VGCYGILGR | FAM30A | 105930496 | 105930660 | + | 0 | 0 | 0 | - | - | 0 | 54 | 5.91 | 6.48 | EOGC, BRCA |
VGDDISK | ENST00000474907.1 | Noncoding_RNA | n[145]VGDDISK | RPL12P24 | 105737607 | 105737765 | - | 0 | 0 | 2 | - | - | 5 | 52 | 5.54 | 9.11 | EOGC, OV |
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