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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGGGEAVTPR | NR_026991.1 | Noncoding_RNA | n[230]VGGGEAVTPR | H1FX-AS1 | 129317024 | 129317161 | + | 0 | 0 | 0 | - | - | 0 | 45 | 4.57 | 8.83 | CCRC, LUAD, UCEC, BRCA, HCC |
VGGGGERR | XR_001752815.1, XR_001752816.1, XR_001752817.1, XR_002958105.1, XR_002958106.1, XR_934324.2, XR_934325.2, XR_934326.2, XR_934328.2, XR_934329.2, XR_934331.2, XR_934332.2 | Noncoding_RNA | LOC105371589 | 21494142 | 21494264 | + | 0 | 0 | 0 | - | - | 0 | 40 | 4.54 | 8.95 | UCEC, LUAD | |
VGGGGNGDNLR | ENST00000622359.1, XR_922063.2, XR_922087.3 | Noncoding_RNA | n[145]VGGGGNGDNLR | AC239799.2 | 146236735 | 146236929 | + | 0 | 0 | 0 | - | - | 0 | 64 | 6.92 | 9.53 | EOGC, BRCA |
VGGGGNGDNLR | ENST00000622359.1, XR_922063.2, XR_922087.3 | Noncoding_RNA | n[145]VGGGGNGDNLR | LOC105371223 | 148687477 | 148687671 | + | 0 | 0 | 0 | - | - | 0 | 64 | 6.92 | 9.53 | EOGC, BRCA |
VGGGGNGDNLR | ENST00000622359.1, XR_922063.2, XR_922087.3 | Noncoding_RNA | n[145]VGGGGNGDNLR | LOC105371254 | 146236735 | 146236929 | + | 0 | 0 | 0 | - | - | 0 | 64 | 6.92 | 9.53 | EOGC, BRCA |
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