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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGLIINAMCVFSSSK | ENST00000265071.2, NM_004932.3 | Downstream_ORF | n[145]VGLIINAMCVFSSSK | CDH6 | 31328413 | 31328634 | + | 1 | 0 | 0 | - | - | 0 | 73 | 8.36 | 10.08 | UCEC, EOGC |
VGLIINAMCVFSSSK | ENST00000265071.2, NM_004932.3 | Downstream_ORF | n[145]VGLIINAM[147]CVFSSSK | CDH6 | 31328413 | 31328634 | + | 1 | 0 | 0 | - | - | 0 | 73 | 8.36 | 10.08 | UCEC, EOGC |
VGLLSEGR | ENST00000620021.4 | Downstream_ORF | TMCO3 | 113554039 | 113554155 | + | 0 | 0 | 0 | + | - | 0 | 38 | 4.16 | 12.51 | UCEC, BRCA, OV, LUAD, EOGC | |
VGLLSEGR | ENST00000620021.4 | Downstream_ORF | n[145]VGLLSEGR | TMCO3 | 113554039 | 113554155 | + | 0 | 0 | 0 | + | - | 0 | 38 | 4.16 | 12.51 | UCEC, BRCA, OV, LUAD, EOGC |
VGLLSEGR | ENST00000620021.4 | Downstream_ORF | n[230]VGLLSEGR | TMCO3 | 113554039 | 113554155 | + | 0 | 0 | 0 | + | - | 0 | 38 | 4.16 | 12.51 | UCEC, BRCA, OV, LUAD, EOGC |
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