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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGGVLPHSR | ENST00000344642.6, NM_001013693.2 | Downstream_ORF | n[145]VGGVLPHSR | LDLRAD2 | 21824051 | 21824233 | + | 1 | 0 | 1 | - | - | 0 | 60 | 6.2 | 7.42 | OSCC, BRCA, HCC |
VGGVLPHSR | ENST00000344642.6, NM_001013693.2 | Downstream_ORF | n[230]VGGVLPHSR | LDLRAD2 | 21824051 | 21824233 | + | 1 | 0 | 1 | - | - | 0 | 60 | 6.2 | 7.42 | OSCC, BRCA, HCC |
VGGVQLMSK | ENST00000649457.1 | Downstream_ORF | n[145]VGGVQLM[147]SK | SAXO1 | 18926694 | 18926789 | - | 0 | 0 | 0 | + | - | 0 | 31 | 3.02 | 10.79 | BRCA, OSCC, OV, HCC, EOGC |
VGGVQLMSK | ENST00000649457.1 | Downstream_ORF | n[230]VGGVQLMSK | SAXO1 | 18926694 | 18926789 | - | 0 | 0 | 0 | + | - | 0 | 31 | 3.02 | 10.79 | BRCA, OSCC, OV, HCC, EOGC |
VGGVQLMSK | ENST00000649457.1 | Downstream_ORF | n[230]VGGVQLM[147]SK | SAXO1 | 18926694 | 18926789 | - | 0 | 0 | 0 | + | - | 0 | 31 | 3.02 | 10.79 | BRCA, OSCC, OV, HCC, EOGC |
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