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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGSMSFEVPSTK | ENST00000367296.8, NM_020443.4, XM_006711609.2, XM_006711610.2, XM_006711611.2, XM_011510098.2, XM_011510100.2, XM_011510101.2, XM_024450645.1 | Out-of-frame_RNA | n[145]VGSMSFEVPSTK | NAV1 | 201794554 | 201807986 | + | 0 | 0 | 3 | - | - | 3 | 62 | 6.81 | 12.65 | EOGC, OV, BRCA, CCRC |
VGSMSFEVPSTK | ENST00000367296.8, NM_020443.4, XM_006711609.2, XM_006711610.2, XM_006711611.2, XM_011510098.2, XM_011510100.2, XM_011510101.2, XM_024450645.1 | Out-of-frame_RNA | n[145]VGSM[147]SFEVPSTK | NAV1 | 201794554 | 201807986 | + | 0 | 0 | 3 | - | - | 3 | 62 | 6.81 | 12.65 | EOGC, OV, BRCA, CCRC |
VGGPTLPDFETCYK | ENST00000627426.2, NM_001207035.1, NM_001207039.1, ENST00000339796.9 | Out-of-frame_RNA | VGGPTLPDFETCYK | ETV7 | 36354535 | 36354657 | - | 0 | 0 | 1 | - | - | 0 | 40 | 4.47 | 8.51 | PRAD, EOGC, OSCC |
VGGPTLPDFETCYK | ENST00000627426.2, NM_001207035.1, NM_001207039.1, ENST00000339796.9 | Out-of-frame_RNA | n[145]VGGPTLPDFETCYK | ETV7 | 36354535 | 36354657 | - | 0 | 0 | 1 | - | - | 0 | 40 | 4.47 | 8.51 | PRAD, EOGC, OSCC |
VGGSESAK | ENST00000557963.1 | Downstream_ORF | VGGSESAK | ALDH1A3 | 100880393 | 100880545 | + | 0 | 0 | 0 | - | - | 0 | 50 | 5.34 | 4.39 | UCEC, LUAD |
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