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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGYSVCRR | XM_011529383.3 | Upstream_ORF | n[230]VGYSVCRR | SLC4A11 | 3240296 | 3240550 | - | 0 | 0 | 0 | - | - | 0 | 84 | 9.54 | 9.18 | BRCA, EOGC, OSCC, CCRC, HCC, LUAD, OV, UCEC |
VHACSGK | ENST00000477596.1 | Noncoding_RNA | n[145]VHACSGK | SF1 | 64766481 | 64766573 | - | 0 | 0 | 0 | + | - | 0 | 30 | 3.56 | 8.24 | OV |
VHAIQAFK | ENST00000338523.8, ENST00000396376.5, ENST00000446848.6, ENST00000619420.4, NM_001199835.1, NM_001199837.1, NM_001199838.1, NM_001318198.1, NM_001318199.1, NM_013322.2, XM_006715712.2, XM_017012085.1, XM_017012086.1, XM_017012087.1 | Downstream_ORF | n[145]VHAIQAFK | SNX10 | 26374083 | 26374232 | + | 0 | 0 | 1 | - | - | 0 | 49 | 5.77 | 8.87 | BRCA, OV, EOGC |
VHCIFIKR | ENST00000579752.1, NR_103559.1 | Noncoding_RNA | VHCIFIKR | CDRT8 | 15105326 | 15105496 | - | 1 | 0 | 0 | + | - | 0 | 56 | 6.34 | 7.35 | CCRC, LUAD, UCEC, HCC |
VHEYWAPDAESIAGMLAWGCLK | XR_941141.1, XR_941139.2 | Noncoding_RNA | n[145]VHEYWAPDAESIAGMLAWGCLK | LOC105377684 | 159614571 | 159616015 | + | 0 | 0 | 0 | - | - | 0 | 51 | 5.92 | 9.34 | EOGC, BRCA |
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