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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VGVGATLGR | NM_001099289.2, XM_011511110.2, ENST00000309415.7 | Downstream_ORF | SH3RF3 | 109503911 | 109504108 | + | 0 | 0 | 0 | - | - | 0 | 65 | 6.84 | 9.44 | LUAD, BRCA, EOGC | |
VGVGATLGR | NM_001099289.2, XM_011511110.2, ENST00000309415.7 | Downstream_ORF | n[145]VGVGATLGR | SH3RF3 | 109503911 | 109504108 | + | 0 | 0 | 0 | - | - | 0 | 65 | 6.84 | 9.44 | LUAD, BRCA, EOGC |
VGVGQVSPGDK | ENST00000600056.1 | Noncoding_RNA | n[145]VGVGQVSPGDK | AC016586.1 | 4061907 | 4062155 | - | 0 | 0 | 0 | - | - | 0 | 82 | 8.8 | 12.27 | EOGC, OV, LUAD, UCEC, BRCA |
VGVGQVSPGDK | ENST00000600056.1 | Noncoding_RNA | n[230]VGVGQVSPGDK | AC016586.1 | 4061907 | 4062155 | - | 0 | 0 | 0 | - | - | 0 | 82 | 8.8 | 12.27 | EOGC, OV, LUAD, UCEC, BRCA |
VGVSMIIVFLK | ENST00000418216.1 | Noncoding_RNA | VGVSMIIVFLK | AC004690.1 | 123932241 | 123932390 | + | 0 | 0 | 1 | - | - | 9 | 49 | 5.86 | 11.1 | LUAD, UCEC, EOGC |
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