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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VIHHSDLK | XM_017013080.2, XM_024447068.1, XM_011517462.3 | Out-of-frame_RNA | VIHHSDLK | RALYL | 84882241 | 84882552 | + | 0 | 0 | 0 | + | - | 4 | 103 | 12.36 | 8.61 | LUAD, OV, UCEC |
VIHHSDLK | XM_017013080.2, XM_024447068.1, XM_011517462.3 | Out-of-frame_RNA | n[145]VIHHSDLK | RALYL | 84882241 | 84882552 | + | 0 | 0 | 0 | + | - | 4 | 103 | 12.36 | 8.61 | LUAD, OV, UCEC |
VIHHSDLK | XM_017013080.2, XM_024447068.1, XM_011517462.3 | Out-of-frame_RNA | n[230]VIHHSDLK | RALYL | 84882241 | 84882552 | + | 0 | 0 | 0 | + | - | 4 | 103 | 12.36 | 8.61 | LUAD, OV, UCEC |
VIHLVMVNIR | ENST00000375460.3, NM_016233.2, XM_011541571.2, XM_017001463.1 | Downstream_ORF | n[145]VIHLVM[147]VNIR | PADI3 | 17283883 | 17284110 | + | 0 | 0 | 1 | + | - | 6 | 75 | 7.79 | 5.7 | BRCA, EOGC, OSCC |
VIIFLAR | XM_011532300.2 | Upstream_ORF | n[145]VIIFLAR | ARHGAP24 | 85826996 | 85827148 | + | 0 | 0 | 0 | - | - | 4 | 50 | 6.05 | 11.03 | EOGC, OV, HCC, BRCA |
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