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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
VLHGALALR | ENST00000265026.7, NM_001242314.1, NM_001242317.1, NM_004721.4, XM_017007456.1 | Downstream_ORF | MAP3K13 | 185484271 | 185484360 | + | 0 | 0 | 1 | + | - | 0 | 29 | 3.33 | 11.04 | HCC, LUAD, CCRC, BRCA, OV | |
VLHGALALR | ENST00000265026.7, NM_001242314.1, NM_001242317.1, NM_004721.4, XM_017007456.1 | Downstream_ORF | n[145]VLHGALALR | MAP3K13 | 185484271 | 185484360 | + | 0 | 0 | 1 | + | - | 0 | 29 | 3.33 | 11.04 | HCC, LUAD, CCRC, BRCA, OV |
VLHGALAR | ENST00000437830.4, NR_125950.1 | Noncoding_RNA | n[145]VLHGALAR | CR589904.1 | 248698933 | 248699070 | + | 0 | 0 | 0 | - | - | 0 | 45 | 4.92 | 12.81 | BRCA, EOGC, OV, UCEC |
VLHGALAR | ENST00000437830.4, NR_125950.1 | Noncoding_RNA | n[145]VLHGALAR | LOC101928226 | 248698933 | 248699070 | + | 0 | 0 | 0 | - | - | 0 | 45 | 4.92 | 12.81 | BRCA, EOGC, OV, UCEC |
VLHGALAR | ENST00000437830.4, NR_125950.1 | Noncoding_RNA | n[230]VLHGALAR | LOC101928226 | 248698933 | 248699070 | + | 0 | 0 | 0 | - | - | 0 | 45 | 4.92 | 12.81 | BRCA, EOGC, OV, UCEC |
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