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Peptides from upstream, downstream and out-of-frame ORFs
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Peptide | Transcripts | Type | Modified peptide | Gene | Start | End | Strand | MS score | TE score | #Species with ortholog | Kozak motif | TIS motif | Domains | Protein length(aa) | Molecular weight | Isoelectric point | Cancers |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
YPMLMNLNNIVK | ENST00000597346.1, NR_002728.3 | Noncoding_RNA | n[145]YPM[147]LMNLNNIVK | KCNQ1OT1 | 2618689 | 2618829 | - | 0 | 0 | 0 | - | - | 0 | 46 | 5.56 | 10.87 | OV |
YPQNLCQLQLK | ENST00000277120.7, ENST00000376214.5, NM_001018064.2, NM_006180.4, XM_005252001.3, XM_005252003.3, XM_005252004.2, XM_011518718.3, XM_017014751.2, XM_017014752.1, XM_017014753.2, XM_017014754.1, ENST00000376213.5 | Downstream_ORF | n[145]YPQNLCQLQLK | NTRK2 | 85022317 | 85022553 | + | 0 | 0 | 1 | + | + | 1 | 78 | 8.9 | 10.55 | BRCA, LUAD |
YPQNLCQLQLK | ENST00000277120.7, ENST00000376214.5, NM_001018064.2, NM_006180.4, XM_005252001.3, XM_005252003.3, XM_005252004.2, XM_011518718.3, XM_017014751.2, XM_017014752.1, XM_017014753.2, XM_017014754.1, ENST00000376213.5 | Downstream_ORF | n[230]YPQNLCQLQLK | NTRK2 | 85022317 | 85022553 | + | 0 | 0 | 1 | + | + | 1 | 78 | 8.9 | 10.55 | BRCA, LUAD |
YPSIHILDAGK | XM_011515879.1 | Upstream_ORF | n[145]YPSIHILDAGK | EPHB6 | 142861515 | 142862789 | + | 0 | 0 | 0 | - | - | 0 | 60 | 6.55 | 10.47 | EOGC, OV |
YPVVPTNPK | ENST00000624920.1, ENST00000622924.2 | Noncoding_RNA | n[145]YPVVPTNPK | AC132872.4 | 82249227 | 82249445 | + | 0 | 0 | 0 | - | - | 0 | 72 | 7.86 | 7.62 | BRCA, CCRC, HCC, UCEC, LUAD |
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